References
If you find DotKnot useful for your research, please cite:
DotKnot: pseudoknot prediction using the probability dot plot under a refined energy model.
Nucleic Acids Research. 2010; 38(7): e103.
Abstract
Heuristic RNA pseudoknot prediction including intramolecular kissing hairpins.
RNA. 2011; 17(1): 27-38.
Abstract